Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013086.1 Corchorus capsularis cultivar CVL-1 contig13107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7939

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2009--2278
35
7.7
34
79
6
249
17
18
22
41
1.90
2009--2278
70
3.9
70
78
4
287
17
18
22
41
1.90
2015--2278
105
2.5
104
82
7
293
17
19
21
42
1.90
2009--2311
35
8.7
35
78
7
161
18
18
22
40
1.91
2308--2493
99
1.9
100
80
10
218
20
15
21
42
1.89
2566--2793
121
1.9
121
81
8
277
26
19
16
36
1.93
2748--3188
63
7.1
63
87
3
486
22
19
17
41
1.91
2748--3121
63
6.0
63
90
3
499
21
19
17
41
1.90
2748--3190
126
3.5
125
86
4
540
22
19
17
41
1.91

Tables:   1

The End!