Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013089.1 Corchorus capsularis cultivar CVL-1 contig13110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12807

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
432--659
71
3.2
71
93
1
375
43
8
23
24
1.81
441--733
142
2.1
135
77
15
297
44
9
22
24
1.82
630--898
37
7.0
38
75
14
187
46
10
18
25
1.80
911--1269
76
4.7
76
97
0
675
44
10
20
24
1.82
915--1379
228
2.0
227
84
7
613
45
10
19
25
1.81
911--1310
152
2.6
151
93
3
577
45
10
20
24
1.82
1437--1653
37
5.9
37
94
0
362
39
8
29
22
1.83
1477--1572
19
5.2
19
63
14
65
37
9
32
20
1.85
1448--1687
111
2.2
109
88
5
326
38
8
29
23
1.84
1665--1815
36
4.2
36
87
2
196
38
9
22
29
1.85
1666--1806
73
1.9
72
86
1
201
39
8
22
29
1.84
4506--4545
7
5.7
7
96
0
62
72
0
22
5
1.04
9854--10141
22
13.1
22
84
1
344
25
23
25
26
2.00
10727--10770
13
3.5
13
78
3
54
81
2
15
0
0.78

Tables:   1

The End!