Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013093.1 Corchorus capsularis cultivar CVL-1 contig13114, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7699

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--576
10
3.8
9
89
10
54
16
0
0
83
0.65
649--682
17
2.0
17
94
0
59
23
5
14
55
1.61
2666--2704
19
2.1
18
85
4
51
30
20
5
43
1.73
2803--3720
455
2.0
454
97
0
1730
39
19
14
26
1.90
5067--5106
21
2.0
20
85
5
53
12
15
45
27
1.82
5233--5298
27
2.4
27
85
5
80
15
15
25
43
1.85
5744--5768
7
3.6
7
100
0
50
76
12
0
12
1.04
5832--5869
20
1.9
20
89
10
60
34
10
15
39
1.82

Tables:   1

The End!