Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013095.1 Corchorus capsularis cultivar CVL-1 contig13116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20203

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2089--2195
33
3.2
32
84
7
117
10
26
43
19
1.83
2176--2216
21
2.0
21
95
0
73
12
36
31
19
1.89
6042--6137
33
2.9
33
83
6
113
28
8
21
41
1.82
6129--6274
33
4.5
32
85
7
181
29
10
19
41
1.84
6126--6274
66
2.3
63
89
5
219
29
10
19
40
1.84
6653--6711
30
2.0
30
83
6
75
30
16
28
23
1.97
7633--7709
33
2.3
33
78
8
84
27
7
20
44
1.79
9886--9929
22
2.0
22
86
0
61
29
25
22
22
1.99
13960--13996
19
2.0
18
89
5
56
24
21
13
40
1.89
16559--16638
33
2.4
33
85
0
115
6
30
38
25
1.80
17563--17618
27
2.0
28
93
3
96
41
14
10
33
1.80
20134--20199
33
2.0
34
87
3
98
7
33
34
24
1.84

Tables:   1

The End!