Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013102.1 Corchorus capsularis cultivar CVL-1 contig13123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22014

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1373--1406
17
2.0
17
94
0
59
55
14
5
23
1.61
3024--3087
33
1.9
33
84
6
85
26
10
21
40
1.86
3124--3206
30
2.6
31
81
5
87
33
6
19
40
1.76
4952--5004
23
2.3
23
90
0
79
18
37
33
9
1.83
8957--8989
3
11.0
3
100
0
66
33
0
0
66
0.92
9502--9607
42
2.6
42
84
10
139
44
29
7
18
1.77
17123--17226
53
2.0
52
92
1
172
19
22
25
33
1.97
17284--17343
17
3.5
17
73
8
59
25
21
20
33
1.97
21165--21189
5
5.0
5
100
0
50
20
0
0
80
0.72
21217--21249
16
1.9
18
88
11
52
33
3
0
63
1.10

Tables:   1

The End!