Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013106.1 Corchorus capsularis cultivar CVL-1 contig13127, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34059

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2367--2410
16
2.8
16
83
16
56
65
0
31
2
1.05
6826--6850
2
12.5
2
100
0
50
52
0
0
48
1.00
7515--7632
52
2.3
52
84
11
156
41
14
16
27
1.87
7515--7632
50
2.3
52
82
8
152
41
14
16
27
1.87
7865--7906
21
2.0
21
100
0
84
33
14
4
47
1.65
15989--16077
3
28.3
3
84
8
106
35
1
1
61
1.11
20727--20768
16
2.7
16
88
3
59
64
9
7
19
1.46
23432--23493
27
2.3
27
100
0
124
24
33
22
19
1.97

Tables:   1

The End!