Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013111.1 Corchorus capsularis cultivar CVL-1 contig13132, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26508

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
597--631
13
2.7
13
100
0
70
20
8
8
62
1.49
628--656
12
2.3
13
94
5
51
31
0
13
55
1.39
9587--9627
20
2.0
21
85
9
57
48
2
2
46
1.28
10324--10359
1
36.0
1
94
0
63
97
0
0
2
0.18
13876--13911
2
18.0
2
100
0
72
50
0
0
50
1.00
16949--16990
6
7.2
6
91
2
68
33
14
0
52
1.42
17017--17066
26
2.0
25
92
4
82
34
14
6
46
1.69
17018--17072
25
2.2
25
87
6
76
36
12
5
45
1.66
17014--17101
31
3.0
31
76
20
91
34
13
4
47
1.63
18108--18148
17
2.5
17
84
11
50
24
9
0
65
1.22
19667--19785
33
3.6
33
87
6
154
12
36
36
14
1.84
19679--19803
33
3.8
33
86
4
123
12
37
36
14
1.83
19868--19949
33
2.5
33
91
0
128
13
31
39
15
1.87
19831--20085
126
2.0
126
94
0
447
24
22
29
23
1.99
19988--20071
33
2.5
33
88
3
125
11
28
41
17
1.85

Tables:   1

The End!