Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013114.1 Corchorus capsularis cultivar CVL-1 contig13135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26568

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1492--1607
60
1.9
61
85
1
162
39
15
14
30
1.87
1523--1632
31
3.6
31
77
9
91
39
17
16
27
1.91
1570--1632
31
2.0
31
93
0
108
41
20
15
22
1.90
1676--1835
60
2.7
60
86
1
205
29
18
16
36
1.92
2743--2779
19
2.0
19
89
5
58
35
0
0
64
0.94
8187--8267
34
2.5
33
80
6
94
65
3
4
25
1.30
18578--18602
2
12.5
2
100
0
50
48
52
0
0
1.00
23046--23083
11
3.5
11
85
10
51
57
2
0
39
1.12
24941--25032
44
2.1
44
86
8
125
35
6
22
34
1.80
25987--26377
201
1.9
201
93
2
669
33
12
18
35
1.89
26220--26559
181
1.9
178
86
3
484
36
11
15
36
1.84

Tables:   1

The End!