Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013116.1 Corchorus capsularis cultivar CVL-1 contig13137, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12412

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1073--1108
14
2.8
14
88
12
51
5
5
8
80
1.01
3092--3152
16
3.9
15
75
10
59
16
6
37
39
1.75
3096--3174
32
2.5
32
93
0
131
15
6
37
40
1.72
3320--3365
16
2.9
16
76
0
56
8
10
28
52
1.66
3371--3444
32
2.3
32
95
0
130
16
10
27
45
1.80
3433--3469
17
2.1
18
90
5
58
2
10
45
40
1.53
6742--6768
14
1.9
14
100
0
54
59
3
0
37
1.15
6935--7053
48
2.5
48
100
0
238
31
21
10
36
1.88
10780--10827
23
2.1
23
100
0
96
37
8
12
41
1.73
11543--11571
12
2.5
12
94
5
51
58
27
10
3
1.47

Tables:   1

The End!