Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013120.1 Corchorus capsularis cultivar CVL-1 contig13141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25625

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2412--2742
35
9.6
34
73
14
232
41
9
17
31
1.81
2418--2636
36
6.2
35
76
8
167
40
10
18
31
1.83
2433--2668
71
3.3
71
79
8
230
39
8
18
32
1.82
2412--2667
107
2.4
107
81
5
288
40
9
17
32
1.82
6082--6130
21
2.3
21
78
0
53
65
10
8
16
1.46
15204--15230
6
4.5
6
100
0
54
85
0
0
14
0.61
18648--19351
49
14.4
47
80
11
417
30
14
31
22
1.94
18685--19300
98
6.3
98
86
3
780
29
14
32
23
1.94
18728--19297
244
2.3
245
91
2
912
29
14
32
23
1.94

Tables:   1

The End!