Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013122.1 Corchorus capsularis cultivar CVL-1 contig13143, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38772

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5121--5247
60
2.1
60
84
5
159
36
19
15
28
1.93
6247--6323
37
2.1
38
87
2
111
25
19
5
49
1.69
9880--9911
12
2.7
12
95
0
55
18
18
9
53
1.71
16244--16300
27
2.1
27
100
0
114
52
14
10
22
1.71
21504--21831
40
8.0
40
78
7
320
15
27
20
36
1.93
21504--21831
81
4.0
81
79
8
315
15
27
20
36
1.93
21586--21871
128
2.2
128
86
1
394
14
26
20
37
1.92
21791--21942
47
3.2
47
83
3
171
13
27
17
40
1.88
21798--21998
47
4.1
49
79
5
153
14
25
16
43
1.86

Tables:   1

The End!