Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013130.1 Corchorus capsularis cultivar CVL-1 contig13151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44973

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70--132
30
2.1
30
93
0
108
9
26
41
22
1.84
93--174
42
2.0
42
90
0
128
10
28
35
25
1.90
4606--4668
30
2.1
30
93
0
108
9
26
41
22
1.84
4629--4710
42
2.0
42
90
0
128
10
28
35
25
1.90
7212--7251
6
6.7
6
88
0
62
2
12
2
82
0.87
7206--7245
12
3.3
12
89
0
53
7
10
2
80
1.00
7550--7591
20
2.2
19
86
4
57
16
4
19
59
1.54
11683--11854
55
3.1
55
91
0
256
31
21
9
37
1.85
19209--19292
36
2.3
36
87
0
114
29
34
13
22
1.92
20128--20166
2
19.5
2
100
0
78
51
48
0
0
1.00
20420--20450
15
2.1
15
93
0
53
32
25
9
32
1.88
21940--21983
23
1.9
23
85
0
61
50
11
25
13
1.75
22099--22145
20
2.4
20
92
3
78
51
14
12
21
1.76
22456--22506
14
3.4
14
80
15
57
15
5
31
47
1.70
23702--24182
166
2.9
163
80
7
531
30
15
15
38
1.89
24993--25395
198
2.0
199
88
1
605
28
18
16
36
1.92
34787--35054
135
2.0
134
89
0
410
20
23
25
29
1.99

Tables:   1

The End!