Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013136.1 Corchorus capsularis cultivar CVL-1 contig13157, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21770

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2375--2403
2
14.5
2
100
0
58
48
0
0
51
1.00
3117--3143
12
2.2
12
100
0
54
7
22
22
48
1.75
4736--4771
19
1.9
18
88
5
54
41
2
22
33
1.68
4891--4915
10
2.5
10
100
0
50
40
24
8
28
1.83
5378--5413
18
2.1
17
94
5
63
11
16
8
63
1.49
9261--9291
16
1.9
16
93
0
53
16
6
22
54
1.64
9374--9412
21
1.9
19
85
10
51
25
10
20
43
1.83
11138--11162
10
2.5
10
100
0
50
40
24
8
28
1.83
11626--11661
18
2.1
17
94
5
63
11
16
8
63
1.49
12679--12725
24
1.9
25
95
4
87
46
8
8
36
1.65
17061--17092
11
2.9
11
90
0
55
37
0
18
43
1.51
19415--19585
48
3.6
48
95
1
317
20
28
17
33
1.95
19555--19611
30
1.9
30
100
0
114
12
31
17
38
1.87
19589--19805
48
4.6
47
90
2
317
19
29
17
33
1.95
19460--19710
125
2.0
125
96
0
457
19
29
17
33
1.94
19588--19805
95
2.3
95
88
1
321
19
29
17
33
1.95
19953--20772
61
13.4
60
83
4
874
25
26
14
33
1.94
20051--20104
28
2.0
27
82
10
65
24
24
18
33
1.97
20231--20333
33
3.3
33
68
22
103
29
27
11
32
1.92
20386--20772
28
12.7
28
63
21
113
25
27
13
33
1.94
19955--20772
306
2.7
306
91
1
1264
25
26
14
33
1.94
20537--20639
33
3.3
33
70
22
112
30
28
10
31
1.90

Tables:   1

The End!