Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013138.1 Corchorus capsularis cultivar CVL-1 contig13159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37924

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1196--1238
13
3.2
14
84
15
56
32
0
6
60
1.23
3987--4013
12
2.2
12
100
0
54
7
92
0
0
0.38
7925--7956
2
16.0
2
100
0
64
50
0
0
50
1.00
15412--15497
42
2.1
41
93
2
145
52
20
4
22
1.65
27829--27863
17
1.9
19
88
11
56
48
5
45
0
1.26
31039--31081
16
2.5
17
85
7
52
60
11
2
25
1.43
35729--35779
20
2.7
18
80
16
59
1
3
17
76
1.03
37883--37924
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!