Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013140.1 Corchorus capsularis cultivar CVL-1 contig13161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13699

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
375--484
39
2.8
38
85
8
141
16
11
29
42
1.83
3059--3089
16
1.9
16
93
0
53
16
29
22
32
1.95
3777--4196
72
5.8
72
82
4
517
32
18
27
20
1.96
3777--4188
145
2.9
143
87
3
580
32
18
27
21
1.97
8373--8482
39
2.8
38
85
8
141
16
11
29
42
1.83
8605--8630
2
13.0
2
100
0
52
50
0
0
50
1.00
10169--10236
19
3.6
19
71
18
61
22
14
25
38
1.92
11123--11198
38
2.0
38
94
0
134
15
31
26
26
1.96
13260--13303
15
3.1
15
70
29
51
25
6
4
63
1.38

Tables:   1

The End!