Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013151.1 Corchorus capsularis cultivar CVL-1 contig13172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27073

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1839--1889
16
3.5
16
77
22
67
50
0
0
49
1.00
1846--1889
14
3.2
14
78
15
56
52
0
0
47
1.00
11444--11595
77
2.0
78
97
1
288
46
8
12
32
1.72
11918--11955
3
12.7
3
100
0
76
31
0
0
68
0.90
19008--19033
1
26.0
1
100
0
52
0
0
0
100
0.00
21657--21708
27
1.9
27
84
0
68
34
34
0
30
1.58
23776--23852
30
2.6
30
87
0
109
35
24
16
23
1.95
23808--23852
15
3.0
15
78
12
56
33
28
20
17
1.95
26309--26431
33
3.7
33
77
8
115
8
26
40
25
1.83

Tables:   1

The End!