Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013154.1 Corchorus capsularis cultivar CVL-1 contig13175, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22525

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4463--4495
3
11.0
3
100
0
66
66
0
33
0
0.92
4654--4679
3
8.7
3
100
0
52
0
30
0
69
0.89
9103--9144
2
21.0
2
95
0
75
47
0
2
50
1.14
12097--12176
30
2.7
31
83
11
96
16
23
22
37
1.93
18794--18842
13
3.8
13
97
0
80
0
40
0
59
0.98
18788--18832
13
3.3
15
90
6
53
0
42
0
57
0.98
20234--20323
27
3.3
27
96
3
164
21
43
16
18
1.88
22494--22525
2
16.0
2
93
0
55
50
3
0
46
1.17

Tables:   1

The End!