Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013155.1 Corchorus capsularis cultivar CVL-1 contig13176, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42905

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
837--868
11
2.9
11
90
0
55
37
0
18
43
1.51
7409--7438
11
2.7
11
94
0
51
40
0
20
40
1.52
7421--7459
18
2.1
18
85
4
51
43
5
20
30
1.73
19823--19852
16
1.9
16
93
6
53
36
3
13
46
1.60
22882--22946
30
2.2
30
100
0
130
30
24
13
30
1.94
36366--36407
21
2.0
20
86
4
57
26
21
11
40
1.88
39058--39132
30
2.5
31
80
6
91
12
29
30
28
1.92
42540--42579
21
1.9
21
89
0
62
57
10
17
15
1.64

Tables:   1

The End!