Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013161.1 Corchorus capsularis cultivar CVL-1 contig13182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25419

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3106--3145
2
20.0
2
100
0
80
0
50
0
50
1.00
10488--10526
15
2.6
15
87
0
60
10
76
0
12
1.01
13080--13109
3
10.0
3
100
0
60
0
33
0
66
0.92
13709--13745
12
3.0
12
84
7
56
10
10
8
70
1.35
16160--16553
78
5.1
78
71
16
307
35
12
1
50
1.50
16160--16397
86
2.9
86
85
6
305
35
12
0
51
1.46
16285--16587
148
2.0
152
94
4
542
36
11
2
48
1.54
16371--16459
31
2.9
31
65
8
74
39
7
2
50
1.44
17458--17496
20
1.9
21
89
5
62
48
2
2
46
1.29
20258--20308
26
2.0
26
96
0
93
13
17
23
45
1.84

Tables:   1

The End!