Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013175.1 Corchorus capsularis cultivar CVL-1 contig13196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40070

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14090--14120
3
10.3
3
92
0
53
0
32
35
32
1.58
14726--14751
2
13.0
2
100
0
52
50
0
0
50
1.00
15521--15573
3
17.7
3
100
0
106
66
0
33
0
0.92
19719--19857
22
6.3
22
78
12
133
41
12
7
38
1.73
19719--19857
43
3.2
43
82
7
147
41
12
7
38
1.73
19719--19888
44
3.9
42
80
7
162
37
14
8
39
1.76
19802--19892
22
4.1
22
77
5
69
35
15
7
41
1.76
19778--19900
22
5.7
21
72
11
63
35
15
7
41
1.75
23490--23652
55
3.0
55
91
1
247
33
19
27
19
1.96
36881--37043
55
3.0
55
91
1
247
33
19
27
20
1.96
37416--37465
17
2.9
17
84
3
64
32
14
30
24
1.94
37812--38104
156
1.9
155
81
8
353
33
18
17
30
1.94

Tables:   1

The End!