Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013182.1 Corchorus capsularis cultivar CVL-1 contig13203, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34836

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2074--2182
33
3.3
33
76
5
139
25
12
20
41
1.88
2065--2207
66
2.2
66
93
0
241
27
11
19
41
1.86
2220--2307
33
2.7
33
89
0
122
31
11
17
39
1.85
2218--2322
33
3.3
31
84
6
113
34
10
17
38
1.84
5283--5376
33
2.9
32
80
4
107
23
37
27
11
1.90
12574--12610
19
2.0
18
89
5
56
40
5
21
32
1.76
13824--13866
22
1.9
23
85
4
61
16
11
6
65
1.46
20115--20162
21
2.4
19
77
12
51
20
4
12
62
1.46
22889--22931
22
1.9
23
85
4
61
16
11
6
65
1.46
23111--23388
73
3.8
74
86
5
370
38
23
15
23
1.92
23347--23540
65
2.9
66
81
9
216
39
22
13
24
1.90
32223--32322
49
2.0
49
100
0
200
48
2
14
36
1.55
32239--32318
27
3.1
27
62
17
71
50
1
13
35
1.50
33026--33086
2
30.5
2
85
12
81
49
1
3
45
1.28
33027--33096
33
2.1
34
97
2
133
47
2
4
45
1.37

Tables:   1

The End!