Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013187.1 Corchorus capsularis cultivar CVL-1 contig13208, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20580

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--39
2
18.5
2
100
0
74
51
0
0
48
1.00
1006--1040
16
2.2
16
89
0
52
37
40
14
8
1.76
1535--1580
23
2.0
23
83
8
58
50
0
6
43
1.28
1644--1886
132
1.8
131
89
5
382
47
2
11
39
1.51
10699--10746
24
2.0
25
83
4
62
16
8
4
70
1.27
12454--12550
31
3.1
31
84
0
131
19
27
21
30
1.98
15940--15988
18
2.7
18
78
6
55
48
4
40
6
1.47
16526--16578
23
2.3
23
93
0
88
39
3
9
47
1.54

Tables:   1

The End!