Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013189.1 Corchorus capsularis cultivar CVL-1 contig13210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23848

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2547--2608
31
2.0
31
90
3
99
29
35
20
14
1.93
4713--4800
33
2.7
33
91
3
142
6
22
45
25
1.77
5345--5378
11
3.2
10
84
15
50
29
2
17
50
1.61
7585--7635
21
2.5
21
87
3
68
27
23
11
37
1.90
7584--7627
10
4.3
10
82
5
61
27
22
11
38
1.88
9493--9527
17
2.1
17
88
0
52
45
20
14
20
1.85
10332--10452
27
4.4
27
87
1
152
19
18
41
20
1.91
10475--10529
24
2.3
24
96
0
101
16
25
25
32
1.96
15060--15184
33
3.8
33
86
6
148
9
23
43
24
1.83
19138--19172
9
3.8
9
88
3
52
14
0
2
82
0.77
20148--20257
33
3.3
33
83
5
125
7
23
45
23
1.78

Tables:   1

The End!