Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013193.1 Corchorus capsularis cultivar CVL-1 contig13214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17209

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66--139
33
2.2
34
88
7
116
9
28
39
22
1.85
2711--2817
33
3.2
34
81
9
98
9
28
39
23
1.85
6946--7038
34
2.8
34
85
6
120
10
23
41
23
1.86
6950--7056
33
3.2
33
77
7
108
11
26
41
21
1.86
10561--10594
8
4.1
8
85
7
50
23
2
14
58
1.50
12025--12105
33
2.5
31
81
13
94
41
17
9
30
1.82
12025--12094
30
2.2
31
85
12
90
44
18
10
27
1.81
12141--12249
33
3.3
33
78
5
130
42
22
11
24
1.86
12116--12256
66
2.1
66
92
0
228
41
20
9
27
1.84
13382--13488
33
3.2
33
88
7
155
9
27
42
20
1.82
15079--15112
8
4.1
8
85
7
50
58
14
2
23
1.50
16679--16792
33
3.6
31
83
5
131
32
10
16
40
1.83

Tables:   1

The End!