Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013201.1 Corchorus capsularis cultivar CVL-1 contig13222, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17432

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
644--872
87
2.6
87
95
0
404
35
17
6
41
1.74
3967--4000
11
3.2
10
84
15
50
29
2
17
50
1.61
5815--5863
26
1.9
25
83
4
62
51
10
20
18
1.75
6806--6845
21
1.9
21
94
0
71
35
22
25
17
1.95
12334--12366
6
5.5
6
100
0
66
54
15
0
30
1.41
15566--15612
21
2.2
22
78
17
55
8
25
48
17
1.74

Tables:   1

The End!