Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013208.1 Corchorus capsularis cultivar CVL-1 contig13229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33191

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5316--5355
20
1.9
22
90
10
66
20
7
5
67
1.34
5327--5366
20
2.0
20
85
0
53
15
7
10
67
1.41
6875--6922
13
3.7
13
91
0
78
22
10
8
58
1.58
6919--6957
6
6.5
6
91
8
62
30
0
15
53
1.42
9039--9171
70
1.9
69
85
3
185
23
14
13
48
1.79
13927--13953
6
4.5
6
100
0
54
55
14
0
29
1.40
15449--15484
17
2.1
17
100
0
72
5
22
5
66
1.34
20066--20275
42
5.0
42
93
2
359
21
15
19
43
1.87
24788--24815
2
14.0
2
100
0
56
50
0
0
50
1.00
28493--28532
17
2.4
17
83
8
55
80
2
15
2
0.93
32283--32328
6
7.5
6
86
13
67
32
17
0
50
1.47
32279--32315
10
3.7
10
85
0
56
29
18
0
51
1.47
32274--32326
20
2.6
20
93
3
88
32
16
0
50
1.46

Tables:   1

The End!