Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013210.1 Corchorus capsularis cultivar CVL-1 contig13231, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48609

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18433--18775
69
5.0
69
93
1
573
41
20
13
25
1.88
23323--23378
16
3.6
16
85
2
78
3
14
41
41
1.63
24169--24218
16
3.1
17
88
8
68
0
20
54
26
1.45
24169--24255
6
14.8
6
77
17
60
1
17
49
32
1.54
24191--24251
16
3.9
15
78
18
61
1
13
45
39
1.53
24314--24340
7
3.9
7
100
0
54
0
14
44
40
1.46
24813--24851
6
6.3
6
85
5
51
2
20
0
76
0.90
33506--33541
18
2.0
18
100
0
72
33
27
11
27
1.91
39222--39270
21
2.3
21
80
16
57
32
14
12
40
1.83
43228--43259
15
2.1
15
100
0
64
37
21
9
31
1.85
43346--43412
28
2.4
28
94
2
116
49
22
8
19
1.76

Tables:   1

The End!