Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013212.1 Corchorus capsularis cultivar CVL-1 contig13233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44728

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4714--4922
104
2.0
102
87
5
296
22
32
24
19
1.97
16432--16565
56
2.4
56
87
0
178
34
15
11
38
1.85
23598--23623
2
13.0
2
100
0
52
50
0
0
50
1.00
42862--42891
11
2.7
11
94
0
51
0
20
0
80
0.72
43158--43209
25
2.1
25
89
7
79
9
21
3
65
1.38
43602--43686
41
2.0
42
90
2
136
42
10
23
23
1.85

Tables:   1

The End!