Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013214.1 Corchorus capsularis cultivar CVL-1 contig13235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33777

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--227
22
10.5
22
70
18
97
42
8
14
34
1.76
122--201
23
3.5
23
86
5
92
42
6
12
38
1.68
1--247
44
5.7
44
73
14
151
41
8
14
35
1.77
212--271
22
2.7
22
73
14
61
35
11
11
41
1.78
289--351
22
2.8
22
78
2
54
31
14
17
36
1.90
296--351
22
2.5
22
82
2
67
30
12
19
37
1.89
267--382
45
2.6
44
75
4
108
34
10
13
41
1.79
628--658
2
16.0
2
93
6
55
51
0
0
48
1.00
1100--1182
42
2.0
42
95
0
148
31
3
12
53
1.55
5980--6014
2
17.0
2
94
5
61
48
0
2
48
1.16
18586--18641
28
2.0
28
89
0
85
37
19
7
35
1.79
24165--24198
11
3.2
10
84
15
50
50
17
2
29
1.61
29465--29539
38
2.0
38
84
2
98
56
5
9
29
1.53
31225--31258
11
3.2
10
84
15
50
50
17
2
29
1.61
32794--33273
164
2.9
164
84
4
642
38
16
15
29
1.90

Tables:   1

The End!