Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013222.1 Corchorus capsularis cultivar CVL-1 contig13243, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23951

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4565--4623
25
2.4
25
91
5
95
35
23
0
40
1.55
4633--4700
26
2.6
26
95
0
118
54
10
0
35
1.35
4633--4677
15
3.3
15
76
23
62
53
11
0
35
1.37
5288--6380
441
2.5
438
86
2
1454
27
12
17
42
1.85
7016--7048
16
2.0
17
88
5
50
24
33
6
36
1.80
16601--16680
40
2.0
40
92
0
133
22
22
21
33
1.97
17501--17613
58
1.9
58
100
0
226
41
25
14
18
1.88
17498--17601
26
3.8
26
71
24
88
41
26
12
19
1.87
18396--18499
43
2.4
43
98
0
199
29
21
19
29
1.97
18482--18569
35
2.5
35
77
0
95
25
26
20
28
1.99
18925--19344
72
5.8
72
89
2
533
22
27
17
31
1.97
22873--22921
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!