Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013223.1 Corchorus capsularis cultivar CVL-1 contig13244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17997

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6385--6415
16
1.9
16
93
0
53
32
22
29
16
1.95
8974--9106
42
3.2
41
79
11
128
36
29
12
21
1.91
9696--9725
12
2.5
12
94
0
51
60
0
36
3
1.14
9752--9802
17
3.2
16
88
5
68
11
13
7
66
1.43
9991--10106
59
2.0
59
96
0
214
23
23
18
34
1.96
9977--10097
28
4.2
28
69
13
84
22
24
19
33
1.97
10101--10270
79
2.2
79
91
2
270
30
27
15
27
1.96
10263--10372
55
2.0
55
89
0
166
25
27
13
33
1.93
11021--11053
6
5.5
6
100
0
66
54
15
0
30
1.41
15359--15582
111
2.0
111
100
0
448
41
19
16
21
1.90
17371--17457
34
2.5
35
86
3
113
59
4
11
24
1.50
17860--17886
6
4.5
6
100
0
54
55
14
0
29
1.40

Tables:   1

The End!