Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013225.1 Corchorus capsularis cultivar CVL-1 contig13246, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15430

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4703--4764
3
20.7
3
100
0
124
0
32
0
67
0.91
5779--5814
18
2.0
18
88
0
54
55
11
8
25
1.62
6367--6475
29
3.7
29
74
11
114
22
11
27
37
1.90
6398--6494
31
3.2
31
71
11
110
19
11
27
41
1.86
6369--6499
60
2.2
60
97
0
253
21
12
28
38
1.89

Tables:   1

The End!