Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013227.1 Corchorus capsularis cultivar CVL-1 contig13248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20456

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1147--1179
2
16.5
2
93
0
57
48
0
3
48
1.17
2471--2520
23
2.1
24
92
3
84
28
22
0
50
1.49
3371--3404
12
2.8
12
90
0
50
85
0
8
5
0.75
9234--9280
15
3.1
15
70
11
51
34
2
2
61
1.20
18069--18095
3
9.0
3
100
0
54
33
0
0
66
0.92
19924--19988
31
2.1
31
94
0
112
18
18
23
40
1.92
20092--20148
21
2.7
21
88
0
78
21
17
28
33
1.96
20326--20369
21
2.1
21
82
0
52
50
9
2
38
1.47

Tables:   1

The End!