Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013232.1 Corchorus capsularis cultivar CVL-1 contig13253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24838

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2897--2925
13
2.2
13
100
0
58
51
0
10
37
1.36
6333--6374
18
2.4
18
84
4
59
50
14
9
26
1.73
10302--10358
16
3.8
16
79
11
75
35
5
28
31
1.79
10303--10365
30
2.1
30
100
0
126
31
6
25
36
1.81
10696--10894
31
6.6
29
72
16
147
34
19
19
27
1.96
10700--10862
60
2.7
59
88
3
236
34
20
19
25
1.96
10921--11089
31
5.6
31
69
16
129
27
20
19
32
1.97
10918--11085
60
2.8
60
90
0
257
27
19
19
32
1.96
14769--14924
78
2.0
78
84
2
206
30
19
26
23
1.98
16723--16760
20
1.9
20
88
0
58
31
21
10
36
1.87

Tables:   1

The End!