Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013236.1 Corchorus capsularis cultivar CVL-1 contig13257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55627

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
2
19.0
2
100
0
76
50
0
0
50
1.00
1046--1077
15
2.1
15
94
5
55
65
0
3
31
1.08
18394--18436
13
3.3
13
90
0
68
51
4
13
30
1.62
32291--32315
12
2.1
12
100
0
50
12
40
16
32
1.84
35965--36024
32
1.9
31
82
3
75
23
25
16
35
1.95
39367--39536
78
2.2
78
89
2
252
48
1
14
35
1.52
39451--39597
69
2.1
71
87
2
208
46
1
12
39
1.50

Tables:   1

The End!