Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013240.1 Corchorus capsularis cultivar CVL-1 contig13261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23893

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1407--1480
33
2.2
34
92
4
125
44
24
12
18
1.84
1418--1489
33
2.2
33
89
0
108
47
23
12
16
1.81
18294--18320
7
3.9
7
100
0
54
88
0
0
11
0.50
20588--20622
15
2.5
14
86
13
54
0
22
0
77
0.78
22465--22548
24
3.5
24
88
0
123
17
42
19
20
1.89
22559--22652
46
2.0
46
100
0
188
29
24
26
19
1.98
22823--22923
33
3.1
33
100
0
202
23
32
2
40
1.70
23812--23892
31
2.6
31
84
0
90
18
23
27
30
1.98

Tables:   1

The End!