Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013247.1 Corchorus capsularis cultivar CVL-1 contig13268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12172

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2243--2288
22
2.1
21
84
11
58
19
8
8
63
1.49
2422--2470
11
4.9
10
80
16
57
36
2
20
40
1.64
2433--2471
18
2.1
19
90
4
62
35
0
20
43
1.52
3812--3869
20
2.9
21
79
5
59
18
6
8
65
1.43
4015--4064
14
3.6
14
78
13
50
32
14
4
50
1.61
4016--4063
10
4.7
10
78
14
53
31
14
2
52
1.54
4157--4417
130
2.0
130
87
3
373
38
8
3
49
1.52
6034--6067
12
2.8
12
90
0
50
26
2
0
70
1.01
6031--6072
18
2.4
17
84
11
50
28
2
0
69
1.01
11522--11854
141
2.4
140
90
1
506
37
9
10
42
1.72

Tables:   1

The End!