Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013249.1 Corchorus capsularis cultivar CVL-1 contig13270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20755

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8248--8276
2
14.5
2
100
0
58
51
0
0
48
1.00
8491--8523
12
2.7
13
86
13
52
18
36
0
45
1.49
10410--10635
112
2.0
112
94
0
398
35
8
18
38
1.81
14748--14833
29
2.9
30
84
8
104
19
24
11
44
1.84
14750--14826
31
2.6
29
84
12
79
19
24
11
44
1.84
14951--15030
29
2.7
29
98
1
151
41
12
25
21
1.88
16958--17068
32
3.6
32
75
6
86
30
27
10
31
1.91

Tables:   1

The End!