Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013252.1 Corchorus capsularis cultivar CVL-1 contig13273, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24893

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--632
297
2.0
297
97
0
1110
38
6
22
32
1.80
666--690
9
2.8
9
100
0
50
48
44
0
8
1.32
6835--6870
15
2.4
15
90
0
54
52
2
25
19
1.59
15391--15456
33
2.0
33
94
2
116
51
15
13
19
1.76
23143--23244
48
2.1
48
84
12
129
15
29
20
34
1.94

Tables:   1

The End!