Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013254.1 Corchorus capsularis cultivar CVL-1 contig13275, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74636

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7730--7788
30
1.9
31
93
3
102
50
13
6
28
1.67
7740--7802
30
2.1
30
84
0
81
58
9
6
25
1.53
13258--13285
6
4.7
6
100
0
56
67
0
14
17
1.22
25971--25995
4
6.2
4
100
0
50
0
24
0
76
0.80
41746--41842
48
2.0
48
91
0
158
37
8
31
22
1.84
53606--53672
25
2.8
24
79
16
77
35
26
0
37
1.57
53682--53749
15
5.1
15
70
26
62
52
11
1
33
1.47
53682--53799
26
4.7
26
76
9
120
54
11
1
33
1.46
53973--54017
21
2.1
21
95
0
81
28
8
42
20
1.82

Tables:   1

The End!