Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013256.1 Corchorus capsularis cultivar CVL-1 contig13277, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27351

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--116
19
3.1
22
74
25
74
42
0
5
51
1.25
186--228
2
23.0
2
81
13
56
51
2
0
46
1.13
6122--6156
1
35.0
1
100
0
70
100
0
0
0
0.00
21569--21600
15
2.1
15
94
0
55
37
0
3
59
1.13
22642--22726
32
2.7
32
88
0
125
16
36
35
11
1.85
23281--23903
22
28.8
22
73
9
392
33
17
14
35
1.89
23301--23665
42
8.4
42
67
13
141
32
16
15
35
1.90
23299--23469
91
1.9
91
80
9
206
32
15
16
35
1.90
23280--23903
64
9.6
63
70
13
270
33
16
14
35
1.89
23771--23904
21
6.3
21
76
11
94
33
18
12
35
1.89
23800--23906
43
2.5
42
76
10
110
32
20
13
33
1.91
24288--24553
22
12.2
21
67
16
89
32
18
13
35
1.89
24434--24463
15
2.0
15
100
0
60
40
0
20
40
1.52
27216--27250
3
11.7
3
100
0
70
31
0
0
68
0.90

Tables:   1

The End!