Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013258.1 Corchorus capsularis cultivar CVL-1 contig13279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34687

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
88
11
56
47
0
2
50
1.15
1684--1809
53
2.4
53
83
4
164
29
20
15
34
1.93
16453--16505
15
3.5
15
84
5
63
15
24
24
35
1.94
19016--19073
15
3.9
15
77
8
64
25
36
13
24
1.92
19016--19073
30
1.9
30
86
6
82
25
36
13
24
1.92
21525--21558
14
2.4
14
90
5
50
0
20
0
79
0.73
22848--23032
73
2.5
72
80
6
194
29
16
21
32
1.95
25270--25381
53
2.1
54
91
5
183
25
10
1
61
1.38

Tables:   1

The End!