Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013261.1 Corchorus capsularis cultivar CVL-1 contig13282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46869

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415--444
15
2.0
15
93
0
51
33
3
26
36
1.73
5078--5143
34
2.1
32
86
11
91
21
22
18
37
1.94
27945--27982
3
12.7
3
100
0
76
68
0
0
31
0.90
42429--42509
29
2.7
29
82
3
99
27
23
11
38
1.88
43198--43255
29
2.0
29
83
6
73
46
12
17
24
1.81
43362--43480
54
2.2
54
100
0
238
26
21
10
42
1.85
43825--43869
11
4.0
11
77
5
54
0
17
0
82
0.68

Tables:   1

The End!