Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013279.1 Corchorus capsularis cultivar CVL-1 contig13300, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22878

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--60
7
7.6
7
75
12
54
55
0
0
44
0.99
86--132
24
2.0
24
100
0
94
21
19
17
42
1.89
10621--10655
17
2.1
17
100
0
70
65
11
5
17
1.43
10726--10791
32
2.1
32
91
0
105
30
19
10
39
1.86
11689--12233
272
2.0
272
96
0
1009
29
9
17
42
1.81
16087--16116
15
2.0
15
93
0
51
20
16
0
63
1.31
16067--16157
24
3.6
24
78
8
83
19
19
2
58
1.50
16097--16199
26
3.7
27
75
13
86
22
20
2
54
1.58
16149--16200
16
3.3
16
75
5
61
25
17
3
53
1.60
16516--16614
34
2.8
36
77
13
114
31
14
4
50
1.61
16511--16629
37
3.3
37
74
12
129
27
15
3
52
1.59
16680--16721
15
2.9
15
89
3
59
26
19
0
54
1.44
16694--16789
22
4.3
23
76
7
92
23
18
2
55
1.54
16658--16743
37
2.4
37
94
2
147
24
19
1
54
1.51
16817--16917
7
14.7
7
66
15
50
16
23
3
55
1.58
16817--16913
14
6.6
14
72
17
72
17
23
4
54
1.60
16782--16901
48
2.5
50
84
11
155
17
21
4
56
1.57
16817--16944
60
2.1
62
88
4
188
14
22
4
57
1.56
19508--19541
17
1.9
18
94
5
61
0
17
2
79
0.86
22194--22237
21
2.1
21
82
0
52
29
18
22
29
1.97

Tables:   1

The End!