Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013281.1 Corchorus capsularis cultivar CVL-1 contig13302, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3165

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1211--1318
36
3.0
36
76
8
121
17
12
26
42
1.86
1203--1306
35
2.9
35
78
7
129
14
14
26
44
1.84
1298--1718
70
6.0
70
89
2
639
21
20
21
36
1.95
1673--1767
34
2.8
33
84
7
93
16
20
26
36
1.93
2072--2166
31
3.1
31
76
13
97
22
11
10
55
1.65
2153--2519
38
9.7
38
83
1
448
28
13
13
44
1.81
2153--2519
76
4.8
76
92
1
574
28
13
13
44
1.81
2848--3132
60
4.7
63
80
8
336
23
18
16
41
1.89
2848--3164
57
5.3
58
76
11
266
23
19
15
41
1.89
2851--3132
121
2.3
119
83
6
334
23
19
15
41
1.90

Tables:   1

The End!