Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013289.1 Corchorus capsularis cultivar CVL-1 contig13310, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29798

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
654--1081
167
2.6
165
82
4
501
40
16
14
28
1.88
1161--1191
15
2.1
15
93
0
53
58
0
0
41
0.98
1612--1700
45
2.0
45
88
4
135
26
23
20
29
1.99
8279--8375
33
3.0
32
85
7
124
21
28
19
29
1.98
12742--12813
31
2.4
29
80
11
81
13
20
25
40
1.90
14333--14386
11
5.3
10
80
17
58
37
18
3
40
1.69
17672--17711
14
2.8
14
92
3
62
62
0
2
35
1.09
26681--26778
16
6.1
16
81
0
124
8
22
35
33
1.84
26685--26755
7
8.9
8
77
20
69
5
21
38
35
1.77
26681--26778
48
2.0
48
88
3
144
8
22
35
33
1.84
26681--26778
32
3.1
32
92
0
151
8
22
35
33
1.84
27274--27327
17
3.4
17
71
23
62
51
0
16
31
1.45
27262--27327
31
2.1
31
100
0
132
50
0
15
34
1.44

Tables:   1

The End!