Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013292.1 Corchorus capsularis cultivar CVL-1 contig13313, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17946

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2937--2982
24
1.9
24
81
0
56
67
2
17
13
1.33
7104--7175
34
2.1
34
94
0
126
33
5
12
48
1.64
7583--7612
15
2.0
15
100
0
60
60
6
20
13
1.55
9897--9977
33
2.5
33
95
0
144
19
30
20
28
1.97
16055--16103
23
2.1
22
81
7
53
36
38
14
10
1.80
16740--16786
22
2.0
24
84
8
62
36
4
4
55
1.39
16906--16960
23
2.4
23
75
6
58
29
40
23
7
1.81
16952--17036
31
2.7
32
83
3
91
42
37
11
8
1.72
16952--17037
16
5.4
16
70
13
79
41
37
12
8
1.73

Tables:   1

The End!