Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013298.1 Corchorus capsularis cultivar CVL-1 contig13319, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18135

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5628--5731
40
2.6
40
92
4
176
29
18
7
44
1.77
12132--12819
36
19.0
36
80
8
545
26
15
11
47
1.79
12239--12815
73
7.9
73
80
8
570
26
14
11
47
1.78
12219--12818
146
4.1
144
82
7
637
26
15
11
47
1.78
12154--12818
73
9.2
71
77
10
432
26
15
11
47
1.79
15489--15513
13
1.9
13
100
0
50
44
16
8
32
1.76
17454--17514
28
2.1
29
82
8
72
19
8
19
52
1.71

Tables:   1

The End!