Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013300.1 Corchorus capsularis cultivar CVL-1 contig13321, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11711

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1049--1102
23
2.3
23
83
3
63
51
9
12
25
1.70
5469--5513
23
2.0
22
83
12
56
68
0
13
17
1.20
6167--6214
20
2.2
23
89
10
75
77
0
20
2
0.88
7306--7371
34
1.9
35
87
3
98
37
18
16
27
1.92
7340--7468
50
2.6
50
89
0
186
31
16
15
36
1.90
8016--8405
139
2.9
138
86
4
535
25
29
17
27
1.97
8003--8405
70
5.9
69
85
4
507
25
29
17
28
1.97
11159--11183
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!