Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013307.1 Corchorus capsularis cultivar CVL-1 contig13328, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16624

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--249
13
2.7
14
84
12
51
28
2
13
55
1.51
3542--3577
18
2.1
17
89
5
54
77
0
0
22
0.76
3927--3978
26
2.0
26
100
0
104
30
15
19
34
1.93
6365--6437
27
2.7
28
76
21
75
23
21
13
41
1.89
6649--6686
13
2.7
14
84
12
51
28
2
13
55
1.51
6832--6888
13
4.3
12
79
16
51
28
1
8
61
1.36
12728--12827
52
1.9
52
93
0
173
39
20
14
27
1.90

Tables:   1

The End!